Package nix.bdtnp.bid

Bio Imaging Database, 2nd pass, see Lisa's code for latest version.

See:
Description

Class Summary

BIDBean	Generic bean holding info related to the BID project
BIDUtil	Utility class to hold database and relevant fields and methods, some from Hall and Brown, most from BioRoot.
Browse	Class to process browse requests
BrowseBean	Bean to hold info related to a Probe which is used in a Stain.
CascadingImageStackReport	Class to process the CascadingStainReportRequests
CascadingStainReport	Class to process the CascadingStainReportRequests
Construct	Class to process the Construct.jsp and create a ConstructBean
ConstructBean	Class to hold params relating to a Construct (a Vector plus insert)
Delme
Embryo	Class to process the the EmbryoPrep.jsp
EmbryoBean	Bean to hold info related to an Embryo found on a Slide.
EmbryoPreparation	Class to process the EmbryoPreparation.jsp and create a EmbryoPreparationBean
EmbryoPreparationBean	Bean to represent an embryo prep
Fluor	Class to process the Construct.jsp and create a FluorBean
FluorBean	Bean to hold info about a fluor
Hybridization	Class to process the params from the Hybridization.jsp .
HybridizationBean	Bean to hold info related to a Hybridization, a collection of stains and embryos.
ImageStack	Class to process the params from the Vector.jsp .
ImageStackBean	Bean to hold info related to a ImageStack, a collection of images taken of an embryo.
Login
Logout
Molecule	Class to process the Construct.jsp and create a MoleculeBean
MoleculeBean	Class to hold params relating to a Construct (a Vector plus insert)
NuclearCloud
NuclearCloudBean	Bean to hold info related to an Embryo found on a Slide.
PatternMatch	Class to hold information and helper methods relating to pattern matches.
Probe	Class to process the Probe.jsp and create a ProbeBean
ProbeBean	Bean to hold info related to a Probe which is used in a Stain.
SecondaryAntibody	Class to process the Construct.jsp and create a SecondaryAntibodyBean
SecondaryAntibodyBean	Bean to hold info about an enzyme attached to an antibody and its substrate
Slide	Class to process the params from the Hybridization.jsp .
SlideBean	Bean to hold info related to a Slide which is derived from a hybridization.
Stain	Class to process the Stain.jsp and create a StainBean
StainBean	Bean to hold info related to a Stain which is used in a Hybridization.
Table
User	Class to process the User info
UserBean	Class to represent a User, pass around in session object
Vector	Class to process the params from the Vector.jsp .
VectorBean	Bean to hold Vector information

Package nix.bdtnp.bid Description

Bio Imaging Database, 2nd pass, see Lisa's code for latest version.