Package nix.util.apps

Scripts for printing arrays, manipulating files, scatter plots...

See:
Description

Class Summary

ArrayPrinter	Prints serialized arrays to screen.
FileJoiner	Joins text files into a single file, avoiding line concatenations.
FileSplitter	Application for splitting a large text file into smaller files given a maximum number of lines.
FileTrimmer	Removes empty lines from text files in a given directory.
GeneNameCounter	Counts the frequency of words in the master list, then assigns these frequencies to words in the test list.
IntersectLists	Compares two lists of words for intersection, all names vs test names.
ScatterDrawFrame	Helper class for ScatterPlot, the frame.
ScatterDrawPanel	Helper class for ScatterPlot, the guts of drawing the scatter plot.
ScatterPlot	Draws a simple scatter plot and calculates a Pearson correlation coefficient for two serialized int[] or float[] arrays.
ScoreChromosomes	Scores chromosomes for the presence of transcription factor binding sites.
ScoreSequences	Scores sequences for the presence of transcription factor binding sites.
TextParser	For parsing a text file into a tab delimited file, working template.

Package nix.util.apps Description

Scripts for printing arrays, manipulating files, scatter plots...